I'm currently working on pangenome graphs in the GenScale research team.

• ❤️ I love algorithm creation, optimization and obfuscation.
• 🌱 I’m currently mainly a Python and Rust developper.
• 💼 I'm a PhD student at INRIA, in Brittany.
• 📖 I used to have courses about teaching and vulgarization.
• 🐲 I'm a roleplayer, some of my repos are linked to this hobby!
• 🎥 I do enjoy filmmaking, and have many ongoing projects.
• 🐱 I may like cats, also. Maybe a lil' too much. Meaow.

Academic work

Conferences

• SeqBim 2023 & DSB 2024 - Towards an edit distance between pangenome graphs.
• MIGGS 2024 - Interfacing pangenome graphs using pancat.

Papers

• Pairwise graph edit distance characterizes the impact of the construction method on pangenome graphs. Siegfried Dubois, Claire Lemaitre, Matthias Zytnicki and Thomas Faraut. bioRxiv 2024.12.06.627166.

Other

• PC member of SeqBim 2024